snipe guided-merge
Merge signatures by experiment groups specified in a TSV file.
snipe guided-merge [OPTIONS]Options
Section titled “Options”| Flag | Type | Required | Default | Description |
|---|---|---|---|---|
--guided-merge | text | yes | — | TSV file mapping experiments to signature paths (experiment<TAB>path). |
-o, --output | text | yes | — | Output directory for merged signatures. |
--sourmash | flag | no | off | Also export merged signatures to sourmash format. |
--keep-acgt | flag | no | off | Preserve ACGT k-mer sequences in output (only if present in source). |
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